Study: Farmers could one day grow “super-pangenome” watermelons

Researchers at the Boyce Thompson Institute have constructed the perfect watermelon—returning “lost” genes from the domesticated fruit’s wild relatives that improve both taste and resilience during the growing process.

watermelon_AdobeStock_7425002.png

Adobe Stock

Could farmers soon be growing and harvesting the perfect watermelon? It is no secret — delivering juicy, delicious “summer smiles” is no easy feat, and producing perfect watermelons from season to season is exceptionally challenging. According to a recent study published in the Plant Biotechnology Journal, watermelon growers may soon get a huge assist from science.

Researchers at the Boyce Thompson Institute recently constructed what they call a “super-pangenome” watermelon—combining the genome of the domesticated fruit and returning “lost” genes from its wild relatives. The researchers say the combination improves the fruit’s taste as well as its resilience during the growing process.

“The super-pangenome provides a valuable genetic toolkit for breeders and researchers to improve cultivated watermelon,” said Professor Zhangjun Fei, the study’s lead author. “By understanding the genetic makeup and evolutionary patterns of watermelons, we can develop varieties with enhanced yield, increased disease resistance, and improved adaptability. Our findings [...] also present significant implications for breeding and disease resistance.”

Genes from wild watermelon varieties that researchers were able to isolate within the super-pangenome control things like sweetness, flesh color, and rind thickness that were lost over centuries of domestication. One particularly exciting discovery was their ability to isolate the “tandem duplication of the sugar transporter gene ClTST2 that enhances sugar accumulation and fruit sweetness in cultivated watermelon.”

To create this super-pangenome watermelon, scientists referenced genes from 547 watermelon types spanning four species—cultivated watermelon (Citrullus lanatus), and its wild relatives: C. mucosospermus, C. amarus, and C. colocynthis.

“These beneficial genes could be reintroduced into modern cultivars to breed more resilient watermelon varieties,” Fei said. “Our findings not only provide insights into the evolutionary journey of watermelons but also present significant implications for breeding and disease resistance.”

The Boyce Thompson Institute study was supported by grants from the USDA National Institute of Food and Agriculture Specialty Crop Research Initiative and the U.S. National Science Foundation.

To read the full study, click the image below:

Behind the Rind: New Genomic Insights into Watermelon Evolution, Quality, and Resilience
Related Stories
Expect firm calf and fed-cattle prices — pair selective heifer retention with prudent hedging and liquidity to bridge rebuilding costs.
The Louisiana cotton crop is the smallest on record, but strong yields are a silver lining. LSU AgCenter’s Craig Gautreaux reports from northeast Louisiana.
Using FEMA and USDA data, Trace One researchers estimate average annual U.S. agricultural losses of $3.48 billion, with drought accounting for more than half.
Soybean farmer and Arkansas Lt. Gov. Leslie Rutledge highlights why the U.S. trade standoff with China is especially critical for Arkansas producers.
Large carryover stocks continue to put pressure on commodity prices, creating uncertainty for growers looking to market their grain.
Support policies that keep U.S. biofuels at the table—marine demand could materially lift corn grind, crush margins, and rural jobs.
Industry leaders say $11 billion in new investments could turn the tide as dairy producers face shrinking margins and growing uncertainty.
Export Inspections In Bushels Show Mixed Momentum Patterns
Expect firmer shop prices, leaner inventories, and selective hiring in ag-adjacent businesses — plan parts, service, and financing needs earlier.

Marion is a digital content manager for RFD-TV and The Cowboy Channel. She started working for Rural Media Group in May 2022, adding a decade of experience in the digital side of broadcast media and some cooking experience to the team.

LATEST STORIES BY THIS AUTHOR:

Wheat futures briefly hit a three-month high before retreating as the markets wait for word on whether the deal will actually happen.
According to Ag Secretary Brooke Rollins, the top three soy-crushing companies in Bangladesh agreed to buy $1 billion worth of U.S. soybeans over the next year.
An import lag for ground beef will likely look different than last year’s egg shortage. The difference comes down to biosecurity and market flexibility.
China’s crusher losses and Brazil tensions, Gale warns, could reopen critical soybean trade channels for U.S. producers.
A rescheduled WASDE, China’s soybean squeeze, barge bottlenecks, and premium beef demand all collide this week — with cash decisions, basis, and risk plans on the line.
Caleb Ragland, president of the American Soybean Association (ASA), shares his reaction to news of soybean sales to China, which is considered both “welcome news” and a return to near-normal trade relations.
Agriculture Shows
From soil to harvest. Top Crop is an all-new series about four of the best farmers in the world—Dan Luepkes, of Oregan, Illinois; Cory Atley, of Cedarville, Ohio; Shelby Fite, of Jackson Center, Ohio; Russell Hedrick, of Hickory, North Carolina—reveals what it takes for them to make a profitable crop. It all starts with good soil, patience, and a strong planter setup.
Champions of Rural America is a half-hour dive into the legislative priorities for Rural America. Join us as we interview members of the Congressional Western Caucus to learn about efforts in Washington to preserve agriculture and tackles the most important topics in the ag industry on Champions of Rural America!
Featuring members of Congress, federal and state officials, ag and food leaders, farmers, and roundtable panelists for debates and discussions.
The goal of “Where the Food Comes From” is as simple as its name implies — host Chip Carter takes you along on the journey of where our food comes from — and we don’t just mean to the supermarket (though that’s part of the big picture!). But beyond where it comes from, how it gets there, and all the links in the chain that make that happen.
Join markets specialist Scott Shellady, better known as the Cow Guy, as he covers the market-close, breaking down headlines that drive the commodities and equities markets with commentary from respected industry heavyweights.